BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003C04LP1|AL425088
(976 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1678 1897 0.0
>3x_Contig1678
Length = 12472
Score = 1897 bits (955), Expect = 0.0
Identities = 967/973 (99%)
Strand = Plus / Minus
Query: 4 aatacaggtctataaaagatggatcagtggttcatgagcctttgccgaacattgatgatg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2746 aatacaggtctataaaagatggatcagtggttcatgagcctttgccgaacattgatgatg 2687
Query: 64 actcttccgatggtatagaactttctgtggtgattcctagctacaatgaaaccagtagaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2686 actcttccgatggtatagaactttctgtggtgattcctagctacaatgaaaccagtagaa 2627
Query: 124 tcaagattatgttggaagaagctatatcctttttacaaaatgagatgaagggtaaatggg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2626 tcaagattatgttggaagaagctatatcctttttacaaaatgagatgaagggtaaatggg 2567
Query: 184 agattattattgtcgatgacggttccagtgatgggacttcggagtattgcatggatttgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2566 agattattattgtcgatgacggttccagtgatgggacttcggagtattgcatggatttgg 2507
Query: 244 ctaagaatcacttcaagcttaatgacggagaatttagagttgttacattggagaaaaatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2506 ctaagaatcacttcaagcttaatgacggagaatttagagttgttacattggagaagaatc 2447
Query: 304 gcggtaaaggaggagcagttagacacgggatgttgcactccagaggcgaatatctattgt 363
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2446 gcggtaaaggaggagcagtaagacacgggatgttgcactccagaggcgaatatctattgt 2387
Query: 364 ttgctgatgctgacggtgcctcgaagttctctgatgttgccaagcttttggcaaacacaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2386 ttgctgatgctgacggtgcctcgaagttctctgatgttgccaagcttttggcaaacacaa 2327
Query: 424 aggttgatgcacccgaggtatcgattggrtcacgtgctcatatggttaacaccgatgcag 483
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2326 aggttgatgcacccgaggtatcgattggatcacgtgctcatatggttaacaccgatgcag 2267
Query: 484 ttgtcaagcgaacaattatcagaaacttcttaatgtactctttacatgcattggtgttca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2266 ttgtcaagcgaacaattatcagaaacttcttaatgtactctttacatgcattggtgttca 2207
Query: 544 tcttcggtattagatctatcaaggacacacaatgtggttttaaattatttaataggaagg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2206 tcttcggtattagatctatcaaggacacacaatgtggttttaaattatttaataggaagg 2147
Query: 604 ctgctaaggaaattttccctaagttacacactgaaggatggattttcgacgttgaaatct 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2146 ctgctaaggaaattttccctaagttacacactgaaggatggattttcgacgttgaaatct 2087
Query: 664 tgatcgttgcgttgcgtaaaaatattccaatcaatgagctaccgatctcatggcatgaag 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2086 tgatcgttgcgttgcgtaaaaatattccaatcaatgagctaccgatctcatggcatgaag 2027
Query: 724 ttgacggttccaaaatggatttggctcgtgacagttttaacatggccaaggatttagtca 783
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2026 ttgacggttccaaaatggatttggctcgtgacagtattaacatggccaaggatttagtca 1967
Query: 784 tcataaggttagcatatatactaggcatatatagcgataaataagcttcatagaatttgc 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1966 tcataaggttagcatatatactaggcatatatagcgataaataagcttcatagaatttgc 1907
Query: 844 gcgaagataaagcgcaagtwaggatatattctatcagattactttcatgaaacattgagt 903
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1906 gcgaagataaagcgcaagtaaggatatattctatcagattactttcatgaaacattgagt 1847
Query: 904 acaacccaagcttttatactggtatgagawagatagaactatagaatatctgaaagtaac 963
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1846 acaacccaagcttttatactggtatgagatagatagaactatagaatatctgaaagtaac 1787
Query: 964 atagtaggtgatt 976
|||||||||||||
Sbjct: 1786 atagtaggtgatt 1774
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6371
Number of Sequences: 1807
Number of extensions: 6371
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 976
length of database: 10,358,551
effective HSP length: 16
effective length of query: 960
effective length of database: 10,329,639
effective search space: 9916453440
effective search space used: 9916453440
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)